| Recognition Site | All Isoschizomers |
| GACGTC | AatII AspJI Ppu1253I Ssp5230I |
| TTCGAA | AcaI AcpI Asp10HI AviI BimI Bim19I Bpu14I BsiCI Bsp82I Bsp90I Bsp101I Bsp102I Bsp104I Bsp119I Bsp148I Bsp151I Bsp241I BspH22I BspH103I BspH106I BspLAII BstBI CbiI Csp45I Csp68KII FspII LspI MlaI Mva16I NspV Nsp29132I NspBI NspFI NspJI PlaII PpaAI Rma376I Rma523I SfuI Sgr1839I Ssp1I Ssp48I Ssp152I SspRFI SviI Uba1385I Uba1452I |
| TGCGCA | AcaIII Acc16I AosI AviII Bco6I BsaTI ClcII CliII FdiII FspI GspAII NsbI NspHIII NspLI NspMI PamI |
| GGYRCC | AccB1I BanI BbvBI Bme05I BshNI Eco50I Eco64I Eco168I Eco169I Eco171I Eco173I Eco195I Esp1I Esp6I Esp9I Esp10I Esp11I Esp12I Esp13I Esp14I Esp15I Esp21I Esp22I Esp25I HgiHI MspB4I PfaAI Pph14I SspM1III Uba1127I Vsp2246I |
| GTMKAC | AccI DsaVI FblI OmiBII XmiI |
| CGCG | AccII Bce31293I BceBI BceRI BepI Bpu95I Bsh1236I Bsp50I Bsp70I Bsp123I BspJ76I BstFNI BstUI Bsu1192II Bsu1193I Bsu1532I Bsu6633I BsuEII BtkI Cpa1150I CpaAI Csp68KVI CspKVI FauBII FspMI Hin1056I HpyF14I HpyF15I HpyF26I HpyF52II HpyF64IV MvaAI MvnI PflAI SceAI SelI ThaI TmaI Uba1321I Uba1404I Uba1405I Uba1446I |
| TCCGGA | AccIII Aor13HI Bbf7411I BbvAIII Bla7920I BseAI BsiGI BsiMI BsiOI Bsp13I Bsp228I Bsp233I Bsp508I BspEI BspH226I BstZ1I BstZ3I Bsu22I Bsu23I CauB3I Cfr57I EspHK26I Kpn2I MroI PinBII PtaI Tsp507I Tsp514I Uba1136I Uba1279I Uba1375I Uba1425I |
| CCGC | AciI |
| AACGTT | AclI Psp1406I |
| GGATC | AclWI AlwI BspPI BsrWI BstH9I Bst31TI BthII Ral8I |
| GRCGYC | AcyI AhaII AosII AstWI AsuIII BbiII BsaHI BstACI HgiI HgiDI HgiGI HgiHII Hin1I Hin8I Hsp92I Msp17I NlaSII PamII SspJII SspM1II SspM2II Uba1381I |
| CTTAAG | AflII BfrI BsaFI BscLI BspTI Bst98I BstPZ740I Cfr92I Esp4I MspCI Uba1266I Uba1299I Uba1312I Uba1313I Uba1331I Uba1374I Uba1420I Uba1426I Uba1443I VfiI Vha464I |
| ACRYGT | AflIII |
| ACCGGT | AgeI AsiAI BshTI CspAI PinAI |
| GGNCC | AhaB1I ApuI AspS9I AvcI Bac36I Bal228I BavAII BavBII Bce22I Bfi105I BsaSI Bse54I BshKI BsiZI Bsp1894I BspBII BspF4I Bsu54I CcuI CdiAI Cfr4I Cfr8I Cfr13I Cfr23I Cfr33I Cfr45I Cfr46I Cfr47I Cfr52I Cfr54I CfrNI Eco39I Eco47II Eco196II Eco201I FmuI GseI Hin5II HpyF66I HpyF71II HpyF73IV MaeK81II MjaII Msp24I MthBI NlaDII NmuEII NmuSI NspIV Nsp7121I NspLII Pde12I Pph1579I Pph1773I PseI PspI PspPI Sau2I Sau5I Sau13I Sau14I Sau17I Sau96I Sau557I SauBI SdyI SelAI Uba1099I Uba1134I Uba1160I Uba1164I UnbI VchO66I VchO85I VchO90I VpaK15I VpaK25I VpaK9AI VpaK19AI VpaK19BI VpaKutAI VpaKutBI VpaKutJI |
| CCSGG | AhaI AseII Asp1I AsuC2I BcnI Bsp7I Bsp8I Bsp55I BspF105I BspJ67I EciDI Eco121I Eco179I Eco190I Eco1831I EcoHI HgiS21I HgiS22I Hin3I Kpn49kII Mgl14481I NciI Pae181I RshII SflHK10695I SflHK11086I SflHK11087I SflHK11572I SflHK115731I Ssp2I Tmu1I Uba41I Uba42I Uba1280I Uba1318I Uba1347I Uba1370I Uba1372I Uba1376I Uba1378I Uba1389I Uba1401I Uba1423I Uba1424I |
| AGCT | AluI BsaLI MarI MltI OtuI OtuNI OxaI Uba1433I Uba1441I |
| GWGCWC | Alw21I AspHI Bbv12I Bfu1570I BsaGI Bsh45I BsiHKAI BsmPI Hpy8III HpyF7II HpyF46II MspV281I Pph3215I |
| CAGNNNCTG | AlwNI CaiI |
| CCTNAGG | AocI AsuSAI AxyI Bli643I BliHKI Bse21I BseG73I BspR7I Bst29I Bst30I BstZ6I Bsu36I CvnI EciCI Eco76I Eco81I Eco115I Eco118I Eco110kI Lmu60I MstII OxaNI SauHI SecIII SshAI Uba1184II Uba1294I Uba1332I Uba1333I |
| GGGCCC | ApaI Bsp120I EciEI PpeI Psp30I PspOMI Uba1156I Uba1157I Uba1165I Uba1202I Uba1241I Uba1368I |
| GTGCAC | ApaLI AaqI Alw44I AmeI Bsp146I DaqI Pfl23I Pfr12I PliI SnoI Uba1203I Uba1387I VneI |
| RAATTY | ApoI AcsI FsiI XapI |
| GGCGCGCC | AscI |
| ATGCAT | AspCIII BfrBI BfrCI Csp68KIII EcoT22I Mph1103I NsiI PinBI Ppu10I SepI SmuCI SrlII Uba1353I Uba1367I Uba1384I Zsp2I |
| CYCGRG | AvaI AcrI Ama87I AquI AspBI AspCI AspDI AvrI BcoI Bse15I BsoBI BstBAII BstNSII Bst7QI BstSI BstZ4I Eco88I Eco27kI EspHK29I NliI Nli3877I NmuAI NspIII NspDI NspEI NspSAI PlaAI PunAI Uba1205II Uba1436I Uba1440I Umi5I |
| GGWCC | AvaII AflI Asp697I Asp745I AspBII AspCII AspDII BamNxI BcuAI Bme18I Bme216I Bsp71I Bsp100I Bsp128I Bsp132I Bsp133I Bsp1260I BspF53I BspJ105I BsrAI Bst4QI BthAI BtiI CauI CliI ClmII Csp68KI DsaIV EagMI Eco47I ErpI FdiI FspMSI FssI GspAI HgiBI HgiCII HgiEI HgiHIII HgiJI Hsp2I Kzo49I MfoI MliI MspAI NliII Nli3877II NmuAII NspDII NspGI NspHII NspKI Pfl19I PolI SfnI Sgh1835I SinI SinAI SinBI SinCI SinDI SinEI SinFI SinGI SinHI SinJI SmuEI SynI TruI Tru28I Tsp301I Uba48I Uba62I Uba1131I Uba1249I Uba1272I Uba1278I Uba1304I Uba1314I Uba1373I Uba1413I Uba1438I Uth554I VpaK11I VpaK65I VpaK7AI VpaK11AI VpaK13AI VpaK11BI VpaK11CI VpaK11DI |
| CCTAGG | AvrII AvrBII BlnI BspA2I XmaJI |
| TGGCCA | BalI MlsI Mlu31I MluNI MscI Msp16I Msp20I |
| GGATCC | BamHI AacI AaeI AcaII AccEBI AinII AliI Ali12257I Ali12258I ApaCI AsiI AspTII Atu1II BamFI BamKI BamNI Bca1259I Bce751I Bco10278I BnaI BsaDI Bsp30I Bsp46I Bsp90II Bsp98I Bsp130I Bsp131I Bsp144I Bsp4009I BspAAIII BstI Bst1126I Bst2464I Bst2902I BstQI Bsu90I Bsu8565I Bsu8646I BsuB519I BsuB763I CelI DdsI GdoI GinI GoxI GseIII MleI Mlu23I NasBI Nsp29132II NspSAIV OkrAI Pac1110I Pae177I Pfl8I Psp56I RhsI Rlu4I RspLKII SolI SpvI SurI Uba19I Uba31I Uba38I Uba51I Uba88I Uba1098I Uba1163I Uba1167I Uba1172I Uba1173I Uba1205I Uba1224I Uba1242I Uba1250I Uba1258I Uba1297I Uba1302I Uba1324I Uba1325I Uba1334I Uba1339I Uba1346I Uba1383I Uba1398I Uba1402I Uba1414I |
| GRGCYC | BanII BpuI BscMI Bsp117I Bsp519I BstZ7I Bsu1854I BvuI Cfr48I Eco24I Eco25I Eco26I Eco35I Eco68I Eco113I Eco180I Eco211I Eco215I Eco216I Eco232I Eco249I Eco262I Eco75KI EcoT38I EcoT88I EcoT93I EcoT95I Ese4I FriOI KoxII OmiAI OmiBI PaeHI Ppu20I Psp31I SacNI Uba39I Uba57I Uba1124I Uba1142I Uba1159I Uba1206I Uba1263I Uba1264I Uba1307I Uba1329I Uba1330I Uba1357I Uba1363I Uba1409I Uba1421I |
| WCCGGW | Bba179I Bca77I BsaWI Bst1473I |
| GAAGAC | Bbr7I BbsI Bbv16II Bco102II BpiI BpuAI BsaVI Bsc91I BscKI BspBS31I BspIS4I BspTS514I BspVI BstBS32I BstTS5I Rtr20I |
| CCTCAGC | BbvCI AbeI |
| GCAGC | BbvI AlwXI BchI BsaUI BseKI BseXI Bsp423I BsrVI Bst12I Bst71I LfeI Lsp1109I |
| ACGGC | BceAI BctI |
| GTATCC | BciVI BfuI |
| TGATCA | BclI AbaI AtuCI Bco102I BmeTI BsiQI BspXII Bst77I BstGI BstKI BstT7I BstZ10II CpeI CthI FbaI Ksp22I PovI SseI SstIV Uba1282I Uba1283I Uba1431I Uba1447I Umi7I |
| CTRYAG | Bco163I BdiSI BfmI BstSFI HpyF2I LlaBI SfcI Srl56DI |
| GCCNNNNNGGC | BglI Bpu86I BseB631I BsoJI Tsp219I Tsp8EI VanI |
| AGATCT | BglII BseB631II NcrI NspMACI Pae2kI Pae18kI |
| GCTNAGC | BlpI Bpu1102I BpuGCI Bsp1720I CelII Uba1221I Uba1222I Uba1284I Uba1320I |
| ACTGGG | BmrI |
| CCTNAGC | Bpu10I BpuDI |
| CGTACG | BpuB5I BsiWI BsmWI BvuBI MaeK81I Pfl23II PfuI PpuAI PspLI SmaAI SplAI SspKI SunI |
| YACGTR | BsaAI BstBAI MspYI Ppu6I Ppu11I Ppu21I PsuAI |
| GATNNNNATC | BsaBI Bco63I Bco631I Bse8I Bse631I Bsh1365I BsiBI BsrBRI MamI |
| CCNNGG | BsaJI BseDI BsoKI BssECI BstZ10I Hpy99IV HpyF10III HpyF61II HpyF67IV Uba1442I |
| CGRYCG | BsaOI BscNI Bsh1285I BsiEI BstMCI BstZ5I Uba1303I |
| CTCAG | BseMII |
| GCGCGC | BsePI BscEI BsoPI BsrHI BssBI BssHII BstBZ153I CfrJ5I Eco143I Eco152I Esp7I Esp8I Kpn30I PauI TtmII Uba69I |
| GAGGAG | BseRI |
| GKGCMC | BseSI Bme1580I |
| GTGCAG | BsgI |
| CCNNNNNNNGG | BsiYI Bsc4I Bsc107I Bse23I BseLI BslI BsmYI |
| GTCTC | BsmAI Alw26I BscQII BsoMAI |
| ACNNNNNCTCC | BsmCI BsmDI BsmXI |
| GGGAC | BsmFI BspLU11III BstOZ616I |
| GAATGC | BsmI Asp26HI Asp27HI Asp35HI Asp36HI Asp40HI Asp50HI BsaMI BscCI Mva1269I Uba1382I Uba1415I |
| TGTACA | Bsp1407I AauI BsmGI BsrGI Bst170I Ssp4800I SspBI |
| TCATGA | BspHI PagI RcaI RhcI RspXI |
| ACATGT | BspLU11I PciI |
| GTATAC | BspM90I BssNAI Bst1107I BstBSI BstZ17I VchO25I XcaI |
| ACCTGC | BspMI Acc36I BfuAI |
| CCGCTC | BsrBI AccBSI BstD102I Bst31NI MbiI |
| GCAATG | BsrDI Bse3DI BseMI |
| ACTGG | BsrI BscHI Bse1I BseNI BsoHI BsrSI Bst11I Tsp1I |
| CACGAG | BssSI Bst2BI |
| ACNGT | Bst4CI HpyCH4III HpyF5II HpyF9III HpyF12I HpyF20I HpyF22I HpyF35III HpyF40I HpyF41I HpyF42II HpyF46I HpyF48II HpyF51II HpyF54I HpyF55I HpyF56I HpyF58I HpyF62I HpyF64II HpyF65I HpyF68I HpyF69I HpyF74I TaaI |
| GCANNNNNTGC | BstAPI |
| CCCGT | BstDZ247I |
| GGTNACC | BstEII AcrII AspAI Bse59I Bse64I BseT9I BseT10I BsiKI Bsp1591I Bst31I BstDI BstPI BstT9I BstT10I Cfr7I Cfr19I EcaI Eci125I Eco91I EcoO65I EcoO128I KoxI NspSAII PspEI SciAI Uba1291I |
| CCANNNNNNTGG | BstXI BscJI BssGI BstHZ55I BstTI |
| CACGTC | BtrI |
| GCAGTG | BtsI |
| GCNNGC | Cac8I |
| RCCGGY | Cfr10I Bco118I BscRI Bse118I Bse634I Bsp21I BsrFI BssAI BstB7SI TseDI |
| YGGCCR | CfrI Bfi89I Cfr14I Cfr38I Cfr39I Cfr40I Cfr55I Cfr59I EaeI EciBI Eco90I Eco164I EcoHAI EcoHK31I EspHK16I EspHK24I KspHK15I Uba36I Uba1188I Uba1327I |
| ATCGAT | ClaI AagI Apu16I Asp707I BanIII BavCI BazI BbvAII Bci29I BciBI BcmI Bco79I BdiI BfrAI Bli41I Bli86I Bli576I Bli585I BliRI Bsa29I BscI BseCI Bsh108AI BsiXI Bsp2I Bsp4I Bsp84I Bsp106I Bsp125I Bsp126I Bsp127I Bsp145I BspDI BspJII BspOVII BspXI BspZEI BsrCI Bst28I BstLVI BstNZ169I Bsu15I BtuI Csp4I LcaI LplI PgaI Rme21I Ssp27144I Uba22I Uba24I Uba30I Uba34I Uba43I Uba1096I Uba1100I Uba1133I Uba1137I Uba1138I Uba1144I Uba1145I Uba1161I Uba1168I Uba1195I Uba1196I Uba1197I Uba1198I Uba1199I Uba1200I Uba1233I Uba1238I Uba1246I Uba1257I Uba1275I Uba1286I Uba1295I Uba1315I Uba1342I Uba1366II Uba1379I Uba1380I Uba1394I Uba1412I Uba1416I Uba1427I Uba1430I Uba1451I Uba1453I |
| RGCY | CviJI CviKI CviLI CviMI CviNI CviOI CviTI |
| TGCA | CviRI Hpy26I HpyCH4V HpyF36III HpyF38II HpyF44III HpyF45II HpyF48III HpyF49V HpyF67II HpyJP26I |
| CTNAG | DdeI BscPI Bst295I BstDEI BstJZ301I HpyCH4II HpyF3I HpyF4II HpyF5I HpyF6III HpyF7I HpyF9II HpyF11I HpyF13II HpyF19I HpyF21I HpyF22II HpyF24II HpyF25I HpyF27I HpyF30II HpyF32I HpyF34I HpyF37I HpyF41II HpyF59I HpyF60II HpyF64V HpyF66II HpyF67I HpyF68II HpyF70I HpyF72II HpyHPK5I |
| TTTAAA | DraI PauAII Srl61DI Srl76DI SruI |
| RGGNCCY | DraII EcoO109I Kaz48kI PssI Uba1326I VneAI |
| CACNNNGTG | DraIII AdeI BstIZ316I |
| GACNNNNNNGTC | DrdI DseDI |
| CCRYGG | DsaI BstDSI BtgI TspBI |
| GACNNNNNGTC | Eam1105I AhdI AspEI BspOVI BstZ2I EclHKI NruGI Uba1190I Uba1191I |
| GGCGGA | EciI BpuCI |
| GGTCTC | Eco31I Bli49I Bli161I Bli576II Bli736I Bli5508I BsaI Bso31I Cfr56I Eco42I Eco51I Eco95I Eco97I Eco101I Eco120I Eco127I Eco129I Eco155I Eco156I Eco157I Eco162I Eco185I Eco191I Eco203I Eco204I Eco205I Eco217I Eco225I Eco233I Eco239I Eco240I Eco241I Eco246I Eco247I Eco263I EcoA4I Eco71KI EcoO44I PpaI Rle69I Sau12I SlbI Uba65I Uba84I Uba1316I Uba1343I VpaK57I VpaK57AI VpaKutHI |
| AGCGCT | Eco47III AfeI AitI Aor51HI FunI |
| CTGAAG | Eco57I Bsp6II BspKT5I Eco112I Eco125I FsfI |
| CCTNNNNNAGG | EcoNI Bpu1268I BsoEI BstWI Uba1289I Uba1290I Uba1308I Uba1309I Uba1310I XagI |
| GAATTC | EcoRI Eco82I Eco159I Eco228I Eco237I Eco252I HalI Hal22I Kpn49kI Ppu111I RsrI Srl32DII Srl55DI SsoI Uba58I Van91II VchN100I VchO2I |
| CCWGG | EcoRII Acc38I AeuI AorI ApaORI ApyI Asp2HI AtuII Atu1I AtuBI BciBII BinSI BsaNI Bse16I Bse17I Bse24I BseBI BshGI BsiLI BsiUI BsiVI BsoGI Bsp44I Bsp56I Bsp103I Bsp317I BspH43I BspNI BspSI Bst1I Bst2I Bst38I Bst100I BstGII BstM6I BstNI BstOI Bst7QII Bst2UI BthDI BthEI CbrI Cdi27I Cfr5I Cfr11I Cfr20I Cfr22I Cfr24I Cfr25I Cfr27I Cfr28I Cfr29I Cfr30I Cfr31I Cfr35I Cfr58I CfrS37I CthII EagKI EcaII EclII Ecl66I Ecl136I Ecl137II EclS39I Ecl37kII Ecl54kI Ecl57kI Ecl1zII Eco38I Eco40I Eco41I Eco60I Eco61I Eco67I Eco70I Eco71I Eco128I Eco170I Eco193I Eco206I Eco207I Eco254I Eco256I Ese6II Esp2I Esp24I EspHK7I EspHK22I EspHK30I Fsp1604I HhdI Kox165I Kpn10I Kpn13I Kpn14I Kpn16I KspHK12I KspHK14I Lla497I Mlu2300I MphI MvaI PspGI Sau16I Scg2I SflHK1794I SflHK2374I SflHK2731I SflHK6873I SflHK7234I SflHK7462I SflHK8401I SflHK10790I Sfl2aI Sfl2bI Sgr20I SleI SniI SslI SspAI Sth117I Sth455I TaqXI TspAI Uba11I Uba13I Uba20I Uba81I Uba82I Uba1114I Uba1118I Uba1120I Uba1121I Uba1125I Uba1171I Uba1181I Uba1185I Uba1189I Uba1193I Uba1218I Uba1243I Uba1410I Uba1428I ZanI |
| GATATC | EcoRV Bsc217I BshLI BsoAI Bsp16I BstRI CeqI Eco17I Eco32I Eco178I HjaI HpyCI NanI NflAI NsiCI Pac1110II Pfl16I Rma495II Rma496II Rma497II SmiMII Tsp273I Uba1400I |
| CGTCTC | Esp3I BsmBI BstGZ53I Esp16I Esp23I |
| CCCGC | FauI BstFZ438I |
| GCNGC | Fnu4HI BsoFI Bsp6I BssFI BssXI Cac824I CcoP215I CcoP216I FbrI Fsp4HI ItaI LlaDII Uur960I |
| GGATG | FokI BseGI BstF5I BstPZ418I HinGUII Hpy178VI HpyF6I HpyF67III StsI |
| GGCCGGCC | FseI |
| CTGGAG | GsuI Bco35I BpmI Bsp22I Bsp28I BspJ74I Uba1437I Uba1444I |
| RGCGCY | HaeII AccB2I Bme142I BsmHI Bsp143II Bst16I Bst1473II BstH2I Btu34II HinHI LpnI NgoAI NgoBI NgoCI NgoGI NgoJI NgoMI NgoWI |
| GGCC | HaeIII AcaIV Asp742I AspTIII AvrBI Bal475I Bal3006I Bce71I Bco33I BecAII Bfi458I Bim19II BliI BluII Bme46I Bme74I Bme361I BsaRI BscQI BseI Bse9I Bse126I BseQI BshI BshAI BshBI BshCI BshDI BshEI BshFI BsiAI BsiDI BsiHI Bsp23I Bsp44II Bsp137I Bsp211I Bsp226I Bsp881I Bsp1261I Bsp1593I Bsp2013I Bsp2362I Bsp2500I BspBDG2I BspBRI BspBSE18I BspBake1I BspCHE15I BspGHA1I BspH106II BspKI BspLRI BspRI BssCI BstCI BstJI Bsu1076I Bsu1114I BsuRI BteI ClmI CltI Csp2I DsaII FinSI FnuDI HhgI Hpy178VII HpyF10V HpyF26II HpyF29I HpyF33II HpyF42I HpyF46V HpyF49IV HpyF53I HpyF57I HpyF63I HpyF69II HpyF72I HpyF73III MchAII MfoAI MniI MnnII MthTI NgoCII NgoNII NgoPII NgoSII NgoTII NlaI NspLKI PaiI PalI Pde133I PflKI PlaI Ple214I PpuI Psp29I SagI SbvI SfaI SplIII SuaI SulI Tsp132I Tsp266I Tsp273II Tsp281I Tsp560I TspZNI TteAI TtnI Uba9I Uba54I Uba61I Uba1097I Uba1140I Uba1146I Uba1147I Uba1150I Uba1152I Uba1153I Uba1155I Uba1169I Uba1174I Uba1175I Uba1176I Uba1178I Uba1179I Uba1207I Uba1208I Uba1209I Uba1210I Uba1214I Uba1223I Uba1228I Uba1230I Uba1231I Uba1235I Uba1288I Uba1292I Uba1293I Uba1319I Uba1322I Uba1336I Uba1377I Uba1388I Uba1392I Uba1395I Uba1408I Uba1418I Uba1422I Uba1429I Uba1449I Uba1450I Uth549I Uth555I Uth557I Van91III VhaI Vha1168I VniI |
| GACGC | HgaI |
| GCGC | HhaI AspLEI BcaI BspLAI CcoP95I CfoI Csp1470I FnuDIII Hin6I Hin7I HinGUI HinP1I HinS1I HinS2I Hpy99III HpyF10I HsoI HspAI MnnIV NgoEII SciNI |
| GTYRAC | HindII ChuII Hin1160II Hin1161II HinJCI HincII MnnI |
| AAGCTT | HindIII Asp52I Asp3065I BbrI BbrAI BpeI BseHI BsmGII BspKT8I BspLAIII Bst170II BstFI BstZ1II Cfr32I ChuI EcoVIII Eco65I Eco98I Eco188I Eco231I Hin5III Hin173I Hin1076III HinJCII HinSAFI HinbIII HinfII HsuI LlaCI MkiI SpaPIV SsbI Uba83I Uba1164II Uba1219I Uba1435I |
| GANTC | HinfI CviBI CviCI CviDI CviEI CviFI CviGI FnuAI HhaII HpyIV HpyAIV HpyF2II HpyF10II HpyF18I HpyF38I HpyF44I HpyF55II HpyF60I HpyF71III HpyF72III NcaI NovII NsiHI SscL1I |
| GTTAAC | HpaI BsaKI BseII BstEZ359I BstHPI KspAI MwhI SsrI Uba1408II |
| CCGG | HpaII Asp748I Bco27I BsaZI BshMI BsiSI Bsp5I Bsp47I Bsp48I Bsp116I Bsp1591II Bst40I Bsu1192I BsuFI FinII HapII Hin2I Hin5I HpyVIII HpyF43I MniII MnoI MspI Pde137I Pme35I SecII SfaGUI Sth134I Uba1128I Uba1141I Uba1267I Uba1338I Uba1355I Uba1439I |
| GGTGA | HphI AsuHPI NgoBVIII NgoDVIII NgoJVIII NgoMVIII SspD5I |
| TCNGA | Hpy188I Hpy166I HpyF11II HpyF12II HpyF15II HpyF17I HpyF19II HpyF27II HpyF28I HpyF33I HpyF42III HpyF46IV HpyF50II HpyF61I HpyF64III |
| TCNNGA | Hpy188III HpyCH4VI HpyF16II HpyF19III HpyF22III HpyF44IV |
| GTNNAC | Hpy8I Hpy166II HpyBII HpyF7III HpyF14II HpyF46III HpyF49III HpyF50I |
| CGWCG | Hpy99I HpyF61III |
| GGTACC | KpnI Acc65I AhaB8I Asp718I BspJ106I Eco149I Esp19I KpnK14I MvsI MvsAI MvsBI MvsCI MvsDI MvsEI NmiI Sau10I SthI SthAI SthBI SthCI SthDI SthEI SthFI SthGI SthHI SthJI SthKI SthLI SthMI SthNI Uba76I Uba85I Uba86I Uba87I Uba1201I |
| CTCTTC | Ksp632I Bco5I Bco116I BcoKI BcoSI BcrAI BseZI BsrEI Bst158I Bsu6I Eam1104I EarI Uba1192I Uba1276I VpaKutEI VpaKutFI VpaO5I |
| CTAG | MaeI BfaI FgoI FisI MjaI MthFI MthZI RmaI Rma485I Rma486I Rma490I Rma495I Rma496I Rma497I Rma500I Rma501I Rma503I Rma506I Rma509I Rma510I Rma515I Rma516I Rma517I Rma518I Rma519I Rma522I XspI |
| ACGT | MaeII HpyCH4IV HpyF13III HpyF35II HpyF74II TaiI TscI Tsp49I TspIDSI TspWAM8AI TtmI |
| GTNAC | MaeIII |
| GATC | MboI DpnI AspMDI AsuMBI Bce243I Bfi57I Bme12I BsaPI BscFI BsmXII BspI Bsp9I Bsp18I Bsp49I Bsp51I Bsp52I Bsp54I Bsp57I Bsp58I Bsp59I Bsp60I Bsp61I Bsp64I Bsp65I Bsp66I Bsp67I Bsp72I Bsp74I Bsp76I Bsp91I Bsp105I Bsp122I Bsp135I Bsp136I Bsp138I Bsp143I Bsp147I Bsp2095I BspAI BspFI BspJI BspJ64I BspKT6I BsrMI BsrPII BssGII Bst1274I BstEIII BstXII BtcI BtkII Btu33I Btu34I Btu36I Btu37I Btu39I Btu41I CacI CcoP31I CcoP76I CcoP84I CcoP95II CcoP219I CcyI CfuI ChaI Cin1467I CjeP338I CpaI CpfI CpfAI Csp5I Cte1179I Cte1180I CtyI CviAI CviHI DpnII FnuAII FnuCI FnuEI HacI HpyAIII HpyHPK5II Kzo9I LlaAI LlaDCHI LlaKR2I Lsp1109II MeuI MgoI MjaIII MkrAI MmeII MnoIII MosI Mph1103II Msp67II MspBI MthI Mth1047I MthAI NanII NciAI NdeII NflI NflAII NflBI NgoDXIV NlaII NlaDI NmeCI NmuDI NmuEI NphI NsiAI NspAI NsuI NsuDI Pei9403I PfaI Pph288I RalF40I Rlu1I SalAI SalHI Sau15I Sau6782I Sau3AI SauCI SauDI SauEI SauFI SauGI SauMI SinMI SmiMBI TruII Tsp133I Uba4I Uba59I Uba1101I Uba1177I Uba1182I Uba1183I Uba1204I Uba1259I Uba1317I Uba1323I Uba1366I Vha44I |
| GAAGA | MboII HpyII Hpy178II HpyAII NcuI TceI |
| CAATTG | MfeI MunI |
| ACGCGT | MluI ApeI Bbi24I BstZ9I Uba6I |
| CCTC | MnlI Hpy166III |
| TTAA | MseI Tru1I Tru9I |
| CAYNNNNRTG | MslI SmiMI |
| GCNNNNNNNGC | MwoI Bce1247I BceCI BspWI HpyF10VI |
| GCCGGC | NaeI Afa24RI AmeII AniMI ApeAI AprI BheI CcoI Eco56I Esp5I MauAI MisI Mlu9273II MroNI NasWI NbaI NbrI NgoAIV NgoMIV NmuI NmuFI NspWI NtaSII PdiI PglI Psp61I RluI SacAI SalCI SaoI SauAI SauBMKI SauHPI SauLPI SauNI SauSI SceIII SkaI Slu1777I Smo40529I SrlI Srl77DI Uba1122I |
| GGCGCC | NarI BbeI BbeAI BinSII Eco78I EgeI EheI KasI McaAI MchI Mly113I MsaI NamI NdaI NunII PatAI PmnI SfoI SseAI |
| CCATGG | NcoI AteI Bse19I Bsp19I NspSAIII |
| CATATG | NdeI FauNDI PfaAII |
| GCSGC | NgoFVII |
| GCTAGC | NheI AceII AsuNHI PstNHI |
| CATG | NlaIII CviAII Hin1II Hin8II HpyI HpyCH4I Hsp92II |
| GGNNCC | NlaIV AspNI BcrI BsaEI BscBI Bsp29I BspLI BssI HpyF44II HpyF73I NgoBV NgoGV PspN4I Rlu3I Uba1305I Uba1445I |
| GCGGCCGC | NotI CciNI CspBI MchAI |
| TCGCGA | NruI AmaI Bsp68I Mlu9273I MluB2I SalDI Sbo13I Sna3286I SpoI Uba1117I Uba1386I VchO70I |
| CMGCKG | NspBII MspA1I |
| RCATGY | NspI BstNSI Lsp1270I NspHI PauAI PunAII XceI |
| TTAATTAA | PacI |
| CCANNNNNTGG | PflMI AccB7I AcpII Asp10HII BasI Esp1396I Van91I |
| GAGTC | PleI BsmEI MlyI PpsI SchI |
| CACGTG | PmaCI BbrPI BcoAI Bsp87I Eco72I Pgl34I PmlI PshCI PshDI Psp38I PspBI VpaK3AI VpaK3BI |
| GTTTAAAC | PmeI MssI |
| RGGWCCY | PpuMI Mlu1106I Pfl27I PpuXI Psp5II PspPPI |
| GACNNNNGTC | PshAI BoxI BstPAI |
| TTATAA | PsiI |
| CTGCAG | PstI AinI AjoI Ali2882I AliAJI ApiI Asp36I Asp708I Asp713I AspTI BbiI Bce170I BloHIII BmeBI BsaNII BsaQI BscDI Bsp17I Bsp43I Bsp63I Bsp78I Bsp81I Bsp93I Bsp107I Bsp108I Bsp268I BspBI BspS122I BsuBI CauIII CflI CfrA4I CfuII ClcI CstI EaePI Ecl77I Ecl133I Ecl593I Ecl37kI Ecl699kI Ecl1zI Ecl2zI Eco48I Eco49I Eco83I Eco161I Eco167I Eco260I Eco261I Esp5II Esp141I GseII HalII Kpn12I MauI MhaAI MizI MkrI MmaI Msp11I NasI NgbI NocI Pae8I Pae9I Pae14I Pae15I Pae22I Pae24I Pae25I Pae26I Pae39I Pae40I Pae41I PaePI Pfl21I Pfl37I PmaI Pma44I PmyI Pph2059I Pph2066I PshEI Psp23I Psp28I Psp46I PspSI Sal13I SalPI ScoAI SflI SgiI SkaII SprLI SriI Srl1DI Srl2DI Srl5DI Srl32DI Uba46I Uba71I Uba72I Uba1112I Uba1115I Uba1116I Uba1119I Uba1123I Uba1149I Uba1184I Uba1186I Uba1211I Uba1212I Uba1213I Uba1215I Uba1216I Uba1225I Uba1232I Uba1256I Uba1262I Uba1287I Uba1294II Uba1296I Uba1328I Uba1337I Uba1399I Uba1411I Uba1417I UbaHKBI VchO87I VpaK4AI VpaK29AI VpaK4BI VpaKutGI XmaII XorI XphI YenI YenAI YenBI YenCI YenDI YenEI |
| CGATCG | PvuI Afa22MI Afa16RI BmaI BmaAI BmaBI BmaCI BmaDI BspCI BstZ8I Cas2I Cfr51I DrdIII EagBI EclJI ErhB9I Kpl79I NblI Ple19I PntI Psu161I Pvu84I RshI RspI SmaAIII SpaPII SplAIII Uba1129I Uba1139I Xgl3216I Xgl3217I Xgl3218I Xgl3219I Xgl3220I XmlI XmlAI XniI XorII |
| CAGCTG | PvuII BavI BavAI BavBI Bsp153AI BspM39I BspO4I Cfr6I DmaI EclI GspI MziI NmeRI Pae17kI Psp3I Psp5I Pvu84II PvuHKUI SbaI SciAII SmaAIV Sol3335I SpaPIII SplAIV Uba1227I Uba1245I |
| GTAC | RsaI AfaI Asp16HI Asp17HI Asp18HI Asp29HI CcoP73I Csp6I CviQI CviRII HpyBI HpyF10IV HpyF13IV HpyF21II HpyF31I HpyF36II HpyF44V HpyF52III HpyF53II HpyF59II HpyF65III HpyF66III MjaV PlaAII |
| CGGWCCG | RsrII CpoI CspI Rsr2I |
| GAGCTC | SacI Ecl136II Ecl137I EcoICRI Eco53kI MxaI NasSI Pfl18I Psp124BI ScoI SstI |
| CCGCGG | SacII AosIII Asp32HI BacI Bac465I BscTI Bsp12I Cfr37I Cfr41I Cfr42I Cfr43I Cfr45II CscI Cte1I DrdAI DrdBI DrdCI DrdEI DrdFI Dsp1I Eae46I EccI Ecl1I Ecl28I Ecl37I Eco55I Eco92I Eco96I Eco99I Eco100I Eco104I Eco134I Eco135I Eco151I Eco158I Eco182I Eco196I Eco208I Eco29kI Ese3I Ese6I FscI GalI GceI GceGLI Kpn19I Kpn378I KspI MraI NgoAIII NgoDIII NgoGIII NgoJIII NgoKIII NgoMIII NgoPIII NlaDIII NlaSI Pae7I Pae17I Pae36I Pae42I Pae43I Pae44I PaeAI PaeQI Pae5kI Pae14kI Pfl1108II SaaI SabI SakI SboI SchZI SenPT14bI SexBI SexCI SfrI Sfr303I Sfr382I SgrBI ShyI SpuI SseII Ssp1725I SstII StaI TglI TtoI Uba66I Uba77I Uba90I Uba1093I Uba1095I Uba1111I Uba1113I Uba1126I Uba1187I Uba1229I Uba1234I Uba1244I Uba1306I Uba1364I Uba1369I UbaHKAI |
| GTCGAC | SalI Acs1371I Acs1372I Acs1373I Acs1421I Acs1422I BspMKI BstZ16I BtgAI CglAII HgiCIII HgiDII KoyI NopI Psp32I Psp33I Psp89I RflFI RheI RhpI RrhI Rrh4273I RroI RtrI Rtr63I Uba89I XamI XciI |
| GGGWCCC | SanDI Sse1825I |
| GCTCTTC | SapI BspQI VpaK32I |
| AGTACT | ScaI Acc113I AflIV Asp763I BshHI BsoSI BstMI DpaI Eco255I NmeSI PinI RflFII Uba1094I Uba1158I VchO49I |
| CCNGG | ScrFI Bme1390I BsaCI BsoI Bsp53I Bsp73I Bsp548I BssKI BstMZ611I DsaV Ecl18kI Eco43I Eco51II Eco80I Eco85I Eco93I Eco153I Eco200I Eco13kI Eco21kI Eco137kI HpyNI Kpn2kI Msp67I MspR9I NlaX SenPI SsoII StyD4I Uba17I Uba1391I |
| GDGCHC | SduI AocII Bka1125I BmyI BsoCI Bsp1286I BspLS2I BstZ15I HpyF36IV HpyF47I Mlu40I NspII TseAI Uba1362I |
| ACCWGGT | SexAI |
| GCATC | SfaNI BscAI BscUI BsmNI BspST5I CjeP338II PhaI |
| GGCCNNNNNGGCC | SfiI SdiI |
| GCGATCGC | SgfI AsiSI |
| CRCCGGYG | SgrAI |
| CCCGGG | SmaI AhyI Cfr9I CfrJ4I EaeAI EclRI KteAI Pac25I PaeBI PspAI PspALI Uba1220I Uba1393I XcyI XmaI XmaCI |
| CTYRAG | SmlI |
| TACGTA | SnaBI BstSNI EciAI Eco105I Eco158II SspJI SspM1I SspM2I Uba1240I |
| ACTAGT | SpeI AclNI BcuI |
| GCATGC | SphI Asp5HI BbuI BscOI Bsp121I BtgAII CglAI PaeI PaeCI PfaAIII RspLKI SpaHI SpaXI Uba1162I Uba1226I VchO68I |
| GCCCGGGC | SrfI |
| CCTGCAGG | Sse8387I SbfI SdaI |
| AATATT | SspI |
| AGGCCT | StuI AatI Asp78I AspMI ChyI Eco147I GdiI GobAI NtaSI PluI Pme55I Ppu13I SarI Sru30DI SseBI SsvI SteI Uba40I Uba1170I Uba1180I Uba1217I Uba1239I Uba1371I Uba1403I Uba1419I VchO44I |
| CCWWGG | StyI BsmSI BssT1I Bst224I CfrBI Eco130I Eco208II EcoT14I EcoT104I ErhI ErhB9II SblAI SblBI SblCI Uba1311I |
| ATTTAAAT | SwaI BstRZ246I BstSWI MspSWI SmiI |
| TCGA | TaqI CviSIII EsaBC3I HpyV Hpy26II HpyF14III HpyF16I HpyF23I HpyF24I HpyF26III HpyF30I HpyF35I HpyF40II HpyF42IV HpyF45I HpyF49I HpyF52I HpyF59III HpyF62II HpyF64I HpyF65II HpyF66IV HpyF71I HpyF73II HpyJP26II PpaAII Taq20I Tbr51I TfiA3I TfiTok4A2I TfiTok6A1I TflI Tsc4aI Tsp32I Tsp32II Tsp358I Tsp505I Tsp510I TspAK13D21I TspAK16D24I TspNI TspVi4AI TspVil3I Tth24I TthHB8I TthRQI |
| WGTACW | TatI |
| GAWTC | TfiI |
| GCWGC | TseI AceI Taq52I TseBI |
| GTSAC | Tsp45I Hpy8II Hpy51I Hpy99II HpyF1I HpyF4I HpyF6II HpyF9I HpyF13I HpyF25II HpyF31II HpyF34II HpyF35IV HpyF36I HpyF40III HpyF48I HpyF49II HpyF51I HpyF62III NmuCI |
| AATT | TspEI MluCI Sse9I TasI TseCI Tsp509I |
| CASTGNN | TspRI |
| GACNNNGTC | Tth111I AspI AtsI FsuI NtaI PflFI PsyI SmaAII SpaPI SplII SplAII TelI TspI TteI TtrI |
| ATTAAT | VspI AseI AsnI BpoAI PshBI Srl8DI Srl55DII Srl65DI Sru4DI |
| TCTAGA | XbaI BspAAII BspLU11II BsrXI Msp23I |
| CCANNNNNNNNNTGG | XcmI |
| CTCGAG | XhoI AbrI AerAI AhyAI Asp15I Asp47I Asp703I BadI BbfI BbiIII BluI Bsp92I Bsp129I Bsp139I Bsp140I Bsp141I Bsp142I BspAAI BssHI BstHI BstLI BstVI BsuMI BthI CcrI CjaI DdeII DrdDI Eae2I MavI McaI MecI MhaI MlaAI MpuI MrhI MscAI MsiI Msp23II OcoI PaeR7I PanI Pfl67I PflNI PflWI Psp4I PspNI Sal1974I Sau3239I SauLPII Sbi68I Sca1827I SciI Sci1831I SciBI ScuI SdiAI SexI Sfr274I Sfu1762I SgaI SgoI Sgr1841I Shy1766I SlaI SluI Sol10179I SpaI Sph1719I SrifpI Ssp4I StaAI StrI Sve194I TliI Uba1130I Uba1148I Uba1154I Uba1166I Uba1237I Uba1248I Uba1271I Uba1298I Uba1335I Uba1397I Uba1448I XpaI |
| RGATCY | XhoII AitII AitAI Asp17I Asp22I Asp1HI Asp6HI Asp8HI Asp14HI Asp21HI BloHI BscSI BstX2I BstYI DsaIII MflI PsuI Tru201I Uba1432I |
| CGGCCG | XmaIII AaaI BseX3I BsoDI BstZI EagI EclXI Eco52I SenPT16I Tsp504I |
| GAANNNNTTC | XmnI Asp700I BbvAI MroXI PdmI SynII |
