Genomes: Microorganisms

Blastomyces dermatitidis fungi

The microbial sequencing effort at the McDonnell Genome Institute currently includes organisms in several categories. One major effort involves the human microbiome - the collection of microbes that colonize the human body. The McDonnell Genome Institute is applying next generation sequencing and analysis technology to analyze the genomes of these and other microbes, characterize the communities they form and measure how they change in health and disease.

Microorganisms Sequenced by MGI

scientific name common name category taxonomy
Paraprevotella xylaniphila YIT11841 Microorganisms Microbe
Parasutterella excrementihominis YIT11859 Parasutterella excrementihominis YIT11859 Microorganisms Microbe
Enterococcus faecalis TX1467 E. faecalis Microorganisms Microbe
Abiotrophia defectiva Microorganisms Microbe
Acinetobacter baumannii 6013113 Microorganisms Microbe
Acinetobacter baumannii 6013150 Microorganisms Microbe
Acinetobacter baumannii 6014059 Microorganisms Microbe
Actinomyces odontolyticus F0309 Microorganisms Microbe
Actinomyces sp. oral taxon 170 F0386 Microorganisms Microbe
Actinomyces sp. oral taxon 171 Microorganisms Microbe
Actinomyces sp. oral taxon 848 Microorganisms Microbe
Anaerobaculum hydrogeniformans Microorganisms Microbe
Bacteroides clarus YIT12056 Microorganisms Microbe
Bacteroides fluxus YIT12057 Microorganisms Microbe
Capnocytophaga sp. Oral taxon 329 F0087 Microorganisms Microbe
Catonella morbi Microorganisms Microbe
Clostridium hathewayi Microorganisms Microbe
Eikenella corrodens Microorganisms Microbe
Corynebacterium ammoniagenes Microorganisms Microbe
Corynebacterium matruchotii Microorganisms Microbe
Dialister invisus Microorganisms Microbe
Enterococcus faecalis DAPTO512 Microorganisms Microbe
Enterococcus faecalis DAPTO516 Microorganisms Microbe
Enterococcus faecalis TX 0043 E. faecalis Microorganisms Microbe
Enterococcus faecalis TX 0411 Microorganisms Microbe
Enterococcus faecalis TX0012 Microorganisms Microbe
Enterococcus faecalis TX0017 Microorganisms Microbe
Enterococcus faecalis TX0027 Microorganisms Microbe
Enterococcus faecalis TX0031 E. faecalis Microorganisms Microbe
Enterococcus faecalis TX0102 Microorganisms Microbe
Enterococcus faecalis TX0109 Microorganisms Microbe
Enterococcus faecalis TX0309A Microorganisms Microbe
Enterococcus faecalis TX0309B Microorganisms Microbe
Enterococcus faecalis TX0312 Microorganisms Microbe
Enterococcus faecalis TX0470 Microorganisms Microbe
Enterococcus faecalis TX0630 Microorganisms Microbe
Enterococcus faecalis TX0635 Microorganisms Microbe
Enterococcus faecalis TX0645 Microorganisms Microbe
Enterococcus faecalis TX0855 E. faecalis Microorganisms Microbe
Enterococcus faecalis TX0860 Microorganisms Microbe
Enterococcus faecalis TX1302 Microorganisms Microbe
Enterococcus faecalis TX1341 Microorganisms Microbe
Enterococcus faecalis TX1342 Microorganisms Microbe
Enterococcus faecalis TX1346 E. faecalis Microorganisms Microbe
Enterococcus faecalis TX2134 E. faecalis Microorganisms Microbe
Enterococcus faecalis TX2137 E. faecalis Microorganisms Microbe
Enterococcus faecalis TX2141 E. faecalis Microorganisms Microbe
Enterococcus faecalis TX4000 E. faecalis Microorganisms Microbe
Enterococcus faecalis TX4244 E. faecalis Microorganisms Microbe
Enterococcus faecalis TX4248 Microorganisms Microbe
Enterococcus faecium TX0082 Microorganisms Microbe
Enterococcus faecium TX0133A Microorganisms Microbe
Enterococcus faecium TX0133a01 Microorganisms Microbe
Enterococcus faecium TX0133a04 Microorganisms Microbe
Enterococcus faecium TX0133B Microorganisms Microbe
Enterococcus faecium TX0133C Microorganisms Microbe
Escherichia coli MS107-1 E. coli Microorganisms Microbe
Escherichia coli MS119-7 E. coli Microorganisms Microbe
Escherichia coli MS124-1 E. coli Microorganisms Microbe
Escherichia coli MS145-7 E. coli Microorganisms Microbe
Escherichia coli MS79-10 E. coli Microorganisms Microbe
Escherichia coli MS85-1 E. coli Microorganisms Microbe
Eubacterium saphenum Microorganisms Microbe
Faecalibacterium prausnitzii KLE1255 K95 Microorganisms Microbe
Fusobacterium periodonticum Microorganisms Microbe
Gemella haemolysans Microorganisms Microbe
Jonquetella anthropi Microorganisms Microbe
Kingella oralis Microorganisms Microbe
Klebsiella sp. MS 92-3 Microorganisms Microbe
Leptotrichia hofstadii F0254 Microorganisms Microbe
Megasphaera micronuciformis F0359 Microorganisms Microbe
Neisseria cinerea Microorganisms Microbe
Neisseria elongata Microorganisms Microbe
Neisseria flavescens Microorganisms Microbe
Neisseria lactamica Microorganisms Microbe
Neisseria mucosa Microorganisms Microbe
Neisseria polysaccharea Microorganisms Microbe
Neisseria sicca Microorganisms Microbe
Neisseria subflava Microorganisms Microbe
Prevotella oris F0302 Microorganisms Microbe
Prevotella tannerae Microorganisms Microbe
Oribacterium sp. oral taxon 078 F0262 Microorganisms Microbe
Prevotella veroralis Microorganisms Microbe
Propionibacterium acnes HL001PA1 Microorganisms Microbe
Propionibacterium acnes HL002PA1 Microorganisms Microbe
Propionibacterium acnes HL002PA2 Microorganisms Microbe
Propionibacterium acnes HL002PA3 Microorganisms Microbe
Propionibacterium acnes HL005PA1 Microorganisms Microbe
Propionibacterium acnes HL005PA2 Microorganisms Microbe
Propionibacterium acnes HL005PA3 Microorganisms Microbe
Propionibacterium acnes HL005PA4 Microorganisms Microbe
Propionibacterium acnes HL007PA1 Microorganisms Microbe
Propionibacterium acnes HL013PA1 Microorganisms Microbe
Propionibacterium acnes HL013PA2 Microorganisms Microbe
Propionibacterium acnes HL020PA1 Microorganisms Microbe
Propionibacterium acnes HL025PA1 Microorganisms Microbe
Propionibacterium acnes HL025PA2 Microorganisms Microbe
Propionibacterium acnes HL027PA1 Microorganisms Microbe
Propionibacterium acnes HL027PA2 Microorganisms Microbe
Propionibacterium acnes HL030PA1 Microorganisms Microbe
Propionibacterium acnes HL030PA2 Microorganisms Microbe
Propionibacterium acnes HL036PA1 Microorganisms Microbe
Propionibacterium acnes HL036PA2 Microorganisms Microbe
Propionibacterium acnes HL036PA3 Microorganisms Microbe
Propionibacterium acnes HL037PA1 Microorganisms Microbe
Propionibacterium acnes HL037PA2 Microorganisms Microbe
Propionibacterium acnes HL037PA3 Microorganisms Microbe
Propionibacterium acnes HL038PA1 Microorganisms Microbe
Propionibacterium acnes HL043PA1 Microorganisms Microbe
Propionibacterium acnes HL043PA2 Microorganisms Microbe
Propionibacterium acnes HL044PA1 Microorganisms Microbe
Propionibacterium acnes HL045PA1 Microorganisms Microbe
Propionibacterium acnes HL046PA1 Microorganisms Microbe
Propionibacterium acnes HL046PA2 Microorganisms Microbe
Propionibacterium acnes HL050PA1 Microorganisms Microbe
Propionibacterium acnes HL050PA2 Microorganisms Microbe
Propionibacterium acnes HL050PA3 Microorganisms Microbe
Propionibacterium acnes HL053PA1 Microorganisms Microbe
Propionibacterium acnes HL053PA2 Microorganisms Microbe
Propionibacterium acnes HL056PA1 Microorganisms Microbe
Propionibacterium acnes HL059PA1 Microorganisms Microbe
Propionibacterium acnes HL059PA2 Microorganisms Microbe
Propionibacterium acnes HL060PA1 Microorganisms Microbe
Propionibacterium acnes HL063PA1 Microorganisms Microbe
Propionibacterium acnes HL063PA2 Microorganisms Microbe
Propionibacterium acnes HL067PA1 Microorganisms Microbe
Propionibacterium acnes HL072PA1 Microorganisms Microbe
Propionibacterium acnes HL072PA2 Microorganisms Microbe
Propionibacterium acnes HL074PA1 Microorganisms Microbe
Propionibacterium acnes HL078PA1 Microorganisms Microbe
Propionibacterium acnes HL082PA1 Microorganisms Microbe
Propionibacterium acnes HL082PA2 Microorganisms Microbe
Propionibacterium acnes HL083PA1 Microorganisms Microbe
Propionibacterium acnes HL083PA2 Microorganisms Microbe
Propionibacterium acnes HL086PA1 Microorganisms Microbe
Propionibacterium acnes HL087PA1 Microorganisms Microbe
Propionibacterium acnes HL087PA2 Microorganisms Microbe
Propionibacterium acnes HL087PA3 Microorganisms Microbe
Propionibacterium acnes HL092PA1 Microorganisms Microbe
Propionibacterium acnes HL096PA2 Microorganisms Microbe
Propionibacterium acnes HL096PA3 Microorganisms Microbe
Propionibacterium acnes HL097PA1 Microorganisms Microbe
Propionibacterium acnes HL099PA1 Microorganisms Microbe
Propionibacterium acnes HL103PA1 Microorganisms Microbe
Propionibacterium acnes HL110PA1 Microorganisms Microbe
Propionibacterium acnes HL110PA2 Microorganisms Microbe
Propionibacterium acnes HL110PA3 Microorganisms Microbe
Propionibacterium acnes HL110PA4 Microorganisms Microbe
Roseburia inulinivorans Microorganisms Microbe
Selenomonas artemidis F0399 Microorganisms Microbe
Selenomonas sputigena Microorganisms Microbe
Shuttleworthia satelles Microorganisms Microbe
Staphylococcus aureus MRSA 131 Microorganisms Microbe
Staphylococcus aureus MRSA 177 Microorganisms Microbe
Streptococcus anginosus F0211 Microorganisms Microbe
Slackia exigua Microorganisms Microbe
Solobacterium moorei F0204 Microorganisms Microbe
Veillonella dispar Microorganisms Microbe
Pseudorabies virus PRV Microorganisms Virus
Hepatitis C virus Hepatitis C Microorganisms Virus
Treponema phagedenis F0421 Microorganisms Microbe
Treponema pallidum subsp. pertenue Microorganisms Microbe
Treponema pallidum subsp. pallidum Microorganisms Microbe
Rickettsia prowasekii Madrid E vir Microorganisms Microbe
Methicillin-Resistant Staphylococcus aureus MRSA Microorganisms Microbe
Fremyella diplosiphon Microorganisms Microbe
Clostridium difficile Microorganisms Microbe
Phascolarctobacterium sp YIT12067 Microorganisms Microbe
Succinatimonas hippei YIT12066 Microorganisms Microbe
Pseudonocardia saturnea NRRL-B16172 Microorganisms Microbe
Pseudonocardia sp AL050513-04 Microorganisms Microbe
Pseudonocardia sp AL041002-03 Microorganisms Microbe
Pseudonocardia sp CC030328-06 Microorganisms Microbe
Anaerococcus hydrogenalis Microorganisms Microbe
Bifidobacterium gallicum Microorganisms Microbe
Providencia rustigianii Microorganisms Microbe
Clostridium hiranonis Microorganisms Microbe
Mitsuokella multacida Microorganisms Microbe
Edwardsiella tarda Microorganisms Microbe
Citrobacter youngae Microorganisms Microbe
Clostridium nexile Microorganisms Microbe
Bifidobacterium bifidum Microorganisms Microbe
Enterobacter cancerogenus Microorganisms Microbe
Bacteroides cellulosilyticus Microorganisms Microbe
Clostridium methylpentosum Microorganisms Microbe
Blautia hansenii (Ruminococcus hansenii) Microorganisms Microbe
Bifidobacterium pseudocatenulatum Microorganisms Microbe
Desulfitobacterium hafniense Microorganisms Microbe
Prevotella copri Microorganisms Microbe
Parabacteroides johnsonii Microorganisms Microbe
Bacteroides coprophilus Microorganisms Microbe
Bifidobacterium catenulatum Microorganisms Microbe
Clostridium hylemonae Microorganisms Microbe
Clostridium celatum Microorganisms Microbe
Holdemania filiformis Microorganisms Microbe
Methanobrevibacter smithiiB181 Microorganisms Microbe
Methanobrevibacter smithiiF1 Microorganisms Microbe
Pseudonocardia sp CC011120-04 Microorganisms Microbe
Desulfovibrio piger (Strain GOR1) Microorganisms Microbe
Roseburia intestinalis L1-82 Microorganisms Microbe
Providencia rettgeri Microorganisms Microbe
Providencia alcalifaciens Microorganisms Microbe
Eubacterium biforme Microorganisms Microbe
Clostridium asparagiforme Microorganisms Microbe
Bifidobacterium angulatum Microorganisms Microbe
Butyrivibrio crossotus Microorganisms Microbe
Collinsella stercoris Microorganisms Microbe
Collinsella intestinalis Microorganisms Microbe
Bifidobacterium breve Microorganisms Microbe
Hyaloperonospora arabidopsidis Microorganisms Fungus
Methanobrevibacter smithii Microorganisms Microbe
Bacteroides plebeius Microorganisms Microbe
Bacteroides pectinophilus Microorganisms Microbe
Bacteroides finegoldii Microorganisms Microbe
Bacteroides eggerthii Microorganisms Microbe
Bacteroides dorei Microorganisms Microbe
Bryantella formatexigens Microorganisms Microbe
Blautia hydrogenotrophica (Ruminococcus hydrogenotrophicus) Microorganisms Microbe
Ruminococcus lactaris Microorganisms Microbe
Bifidobacterium dentium Microorganisms Microbe
Coprococcus comes Microorganisms Microbe
Clostridium sporogenes Microorganisms Microbe
Streptococcus infantarius Microorganisms Microbe
Proteus penneri Microorganisms Microbe
Providencia stuartii Microorganisms Microbe
Bacteroides intestinalis Microorganisms Microbe
Bacteroides coprocola Microorganisms Microbe
Saccharomyces cerevisiae WE372 Microorganisms Fungus
Saccharomyces cerevisiae FL100 Microorganisms Fungus
Saccharomyces cerevisiae CLIB382 Microorganisms Fungus
Saccharomyces cerevisiae CLIB215 Microorganisms Fungus
Saccharomyces cerevisiae YJM280 Microorganisms Fungus
Saccharomyces cerevisiae YJM320 Microorganisms Fungus
Saccharomyces cerevisiae YJM428 Microorganisms Fungus
Saccharomyces cerevisiae T7 Microorganisms Fungus
Saccharomyces cerevisiae Y10 Microorganisms Fungus
Saccharomyces cerevisiae NC-02 Microorganisms Fungus
Saccharomyces cerevisiae YPS1009 Microorganisms Fungus
Saccharomyces cerevisiae YJM653 Microorganisms Fungus
Saccharomyces cerevisiae YJM451 Microorganisms Fungus
Saccharomyces cerevisiae T73 Microorganisms Fungus
Saccharomyces cerevisiae YJM421 Microorganisms Fungus
Saccharomyces cerevisiae CBS7960 Microorganisms Fungus
Saccharomyces cerevisiae YJM269 Microorganisms Fungus
Saccharomyces cerevisiae YJM326 Microorganisms Fungus
Saccharomyces cerevisiae CLIB324 Microorganisms Fungus
Saccharomyces cerevisiae Y12 Microorganisms Fungus
Saccharomyces cerevisiae Y9 Microorganisms Fungus
Saccharomyces cerevisiae PW5 Microorganisms Fungus
Saccharomyces cerevisiae IL-01 Microorganisms Fungus
Saccharomyces cerevisiae I14 Microorganisms Fungus
Saccharomyces cerevisiae UC5 Microorganisms Fungus
Clostridium bartlettii Microorganisms Microbe
Anaerotruncus colihominis Microorganisms Microbe
Alistipes putredinis Microorganisms Microbe
Clostridium ramosum Microorganisms Microbe
Anaerofustis stercorihominis Microorganisms Microbe
Bacteroides stercoris Microorganisms Microbe
Roseburia faecis M72/1 Microorganisms Microbe
Clostridium sp. GM2/1 Microorganisms Microbe
Catenibacterium mitsuokai Microorganisms Microbe
Eubacterium dolichum Microorganisms Microbe
Clostridium spiroforme Microorganisms Microbe
Clostridium leptum Microorganisms Microbe
Eubacterium siraeum Microorganisms Microbe
Anaerostipes caccae Microorganisms Microbe
Clostridium sp. A2-232 Microorganisms Microbe
Clostridium sp. L2-50 Microorganisms Microbe
Eubacterium sp. L2-7 Microorganisms Microbe
Clostridium sp. M62/1 Microorganisms Microbe
Faecalibacterium prausnitzii M21/2 Microorganisms Microbe
Faecalibacterium prausnitzii A2-165 Microorganisms Microbe
Clostridium sp. SS2/1 Microorganisms Microbe
Bifidobacterium adolescentis Microorganisms Microbe
Bacteroides uniformis Microorganisms Microbe
Parabacteroides merdae Microorganisms Microbe
Bacteroides ovatus Microorganisms Microbe
Eubacterium plautii Microorganisms Microbe
Coprococcus eutactus Microorganisms Microbe
Ruminococcus callidus Microorganisms Microbe
Clostridium symbiosum Microorganisms Microbe
Subdoligranulum variabile Microorganisms Microbe
Ruminococcus gnavus Microorganisms Microbe
Eubacterium hallii Microorganisms Microbe
Clostridium scindens Microorganisms Microbe
Bacteroides capillosus Microorganisms Microbe
Actinomyces odontolyticus Microorganisms Microbe
Collinsella aerofaciens Microorganisms Microbe
Clostridium bolteae Microorganisms Microbe
Bacteroides caccae Microorganisms Microbe
Eubacterium ventriosum Microorganisms Microbe
Dorea longicatena Microorganisms Microbe
Dorea formicigenerans Microorganisms Microbe
Ruminococcus torques Microorganisms Microbe
Ruminococcus obeum Microorganisms Microbe
Desulfovibrio piger (ATCC 29098) Microorganisms Microbe
Peptostreptococcus micros Microorganisms Microbe
Symbiodinium sp. Dinoflagellate Microorganisms Protist
Salmonella enterica serovar Paratyphi B Microorganisms Microbe
Saccharomyces kluyveri Yeast Microorganisms Fungus
Physarum polycephalum Slime Mold Microorganisms Protist
Oxytricha trifallax Ciliated Protozoa Microorganisms Protist
Blastomyces dermatitidis Microorganisms Fungus
Histoplasma capsulatum Microorganisms Fungus
Eubacterium rectale type strain ATCC 33656 Microorganisms Microbe
Eubacterium eligens ATCC 27750 Microorganisms Microbe
Bacteroides thetaiotaomicron strain 3731 Microorganisms Microbe
Bacteroides thetaiotaomicron strain 7330 Microorganisms Microbe
Bacteroides novel strain WH2 Microorganisms Microbe
Bacteroides distasonis type strain ATCC 8503 Microorganisms Microbe
Bacteroides vulgatus type strain ATCC 8482 Microorganisms Microbe
Salmonella enterica serovar Typhimurium strain LT2 Microorganisms Microbe
Salmonella enterica subspecies IIIb (Diarizonae) serovar 61:1,v:1,5,(7) Microorganisms Microbe
Salmonella enterica subspecies IIIa (Arizonae) serovar 62:z4,z23:-- Microorganisms Microbe
Klebsiella pneumoniae Microorganisms Microbe
Klebsiella oxytoca M5al Microorganisms Microbe
Enterobacter sakazakii Microorganisms Microbe
Vibrio harveyi Microorganisms Microbe
Citrobacter (diversus) koseri Microorganisms Microbe
Salmonella enterica serovar Paratyphi A Microorganisms Microbe
Alternaria brassicicola Microorganisms Fungus