Mingchao Xie,  McDonnell Genome Institute

Publications

title citation publication date
MIRMMR: binary classification of microsatellite instability using methylation and mutations Bioinformatics. 2017 Aug 17. doi: 10.1093/bioinformatics/btx507. [Epub ahead of print] 1970-08-22
Divergent viral presentation among human tumors and adjacent normal tissues Sci Rep. 2016 Jun 24;6:28294. doi: 10.1038/srep28294. 1970-08-22
The impact of chromosomal translocation locus and fusion oncogene coding sequence in synovial sarcomagenesis. Oncogene. 2016 Mar 7. doi: 10.1038/onc.2016.38. [Epub ahead of print] 2016-03-07
Patterns and functional implications of rare germline variants across 12 cancer types. Nat Commun. 2015 Dec 22;6:10086. doi: 10.1038/ncomms10086. 2015-12-15
Systematic discovery of complex insertions and deletions in human cancers. Nat Med. 2015 Dec 14. doi: 10.1038/nm.4002. [Epub ahead of print] 2015-12-14
Age-related mutations associated with clonal hematopoietic expansion and malignancies. Nat Med. 2014 Oct 19. doi: 10.1038/nm.3733. [Epub ahead of print] 2014-10-19
Integrated analysis of germline and somatic variants in ovarian cancer. Nat Commun. 2014 Jan 22;5:3156. doi: 10.1038/ncomms4156. 2014-01-22
MSIsensor: microsatellite instability detection using paired tumor-normal sequence data. Bioinformatics. 2013 Dec 25. [Epub ahead of print] 2013-12-24
Mutational landscape and significance across 12 major cancer types. Nature. 2013 Oct 17;502(7471):333-9. doi: 10.1038/nature12634. 2013-10-17