FASTAParse
A light-weight parsing module for handling FASTA formatted sequence within larger perl applications.
Package
- category: genome annotation
- operating system: OS independent (Perl)
- license: perl artistic
- project administrator: Todd Wylie
- download: CPAN
Overview
FASTAParse is pretty simple in that it does one of two things:
- loads a FASTA object from a chunk of text;
- formats a FASTA object given explicit user input.
See SYNOPSIS for example code for both functions. Once populated, individual sections of the FASTA entry may be pulled from the object. For further information on FASTA format, please see: FASTA format.
